Delicious Sourdough Discard Muffins Recipe for Zero Waste Baking

These sourdough discard muffins with chocolate chips are bakery-style treats with a dense yet tender crumb. Muffins are an excellent way to use up unfed sourdough starter discard, and they make a convenient snack or a delicious companion to your morning coffee.

A wire cooling rack with 6 chocolate chip muffins.

Do you have a sourdough starter and end up with discard to spare? This chocolate chip muffin recipe is simple, flexible, and forgiving—perfect if you’re exploring recipes that use discard.

🍫Ingredients

Ingredients to make muffins. Sourdough starter, sugar, chocolate chips, milk, butter, eggs, sour cream, vanilla extract, eggs, baking powder, salt, cinnamon and flour.

Sourdough starter discard: This recipe uses unfed (inactive) sourdough discard—starter that has been fed, peaked, and then deflated. Active starter can also be used, but the flavor and rise may differ slightly.

All-purpose flour: Use all-purpose flour for the best texture; bread flour will make the muffins heavier.

Sour cream: Full-fat sour cream gives a rich, moist crumb; whole-milk yogurt is an acceptable substitute. Use full-fat for the best results.

Eggs: Use room-temperature eggs so they blend easily into the batter.

See the recipe card below for full ingredient quantities.

🥣How to Make

Step 1: Preheat the oven to 425°F (220°C).

Step 2: Line a 12-cup muffin tin with paper liners or grease the cups. Set aside.

Four images of muffins being mixed. The flour mix, wet ingredients then folding together.

Step 3: In a medium bowl whisk together the dry ingredients: all-purpose flour, baking powder, kosher salt, and ground cinnamon. Set aside.

Step 4: In a large bowl combine the melted, cooled butter and granulated sugar until the sugar is dispersed. Stir in the sourdough discard.

Step 5: Add the milk and sour cream, mixing until the mixture is smooth.

Step 6: Beat in the eggs and vanilla just until combined—avoid overmixing.

Step 7: Fold the dry ingredients into the wet mixture until just combined. Small lumps are fine; overmixing will toughen the muffins.

Step 8: Fold in the chocolate chips until distributed throughout the batter.

Step 9: Divide the batter evenly among the 12 muffin cups—using a cookie scoop makes this easier.

A cookie scoop dividing out muffin batter into a baking pan.

Step 10: Bake at 425°F for 5 minutes. Then reduce the oven temperature to 350°F (175°C) and continue baking for 25–30 minutes, or until the muffin tops are golden brown and a toothpick inserted into the center comes out clean.

Step 11: Remove the pan from the oven and let the muffins cool in the pan for 10 minutes.

Step 12: Transfer the muffins to a wire rack to cool. They are best enjoyed warm.

A vintage cooling rack with sourdough discard muffins.

❓Recipe FAQs

Can you freeze sourdough muffins?

Yes. Allow the muffins to cool completely, then store them in a freezer-safe container or bag. Thawed muffins may be slightly softer but still tasty—reheat briefly to refresh.

🍞More Sourdough Recipes

  • Sourdough Discard Recipes
  • Sourdough Cookie Recipes
  • 25+ Sourdough Breakfast Recipes
  • Sourdough Focaccia Bread

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đź“‹Recipe

A vintage cooling rack with sourdough discard muffins.

Sourdough Discard Muffins

These chocolate chip sourdough discard muffins have a soft, slightly dense crumb—perfect for using leftover starter and enjoying with coffee or as a snack.
Prep Time: 10 mins
Cook Time: 30 mins
Total Time: 40 mins
Servings: 12 muffins
Calories: 358 kcal (per muffin)

Equipment

  • 12-cup muffin pan
  • Mixing bowls
  • Wire cooling rack

Ingredients

  • 2 1/2 cups all-purpose flour
  • 2 teaspoons baking powder
  • 1 teaspoon kosher salt
  • 1 teaspoon ground cinnamon
  • 8 tablespoons melted butter, cooled
  • 1 cup granulated sugar
  • 1 cup sourdough discard
  • 2 eggs, room temperature
  • 1 teaspoon vanilla extract
  • 1/3 cup sour cream, room temperature
  • 1 cup whole milk, room temperature
  • 1 cup chocolate chips

Instructions

  1. Preheat oven to 425°F (220°C).
  2. Prepare a 12-cup muffin tin with liners or spray and set aside.
  3. Whisk together flour, baking powder, salt, and cinnamon in a medium bowl. Set aside.
  4. In a large bowl, combine melted cooled butter and sugar. Mix in the sourdough discard.
  5. Add milk and sour cream, stirring until smooth.
  6. Mix in eggs and vanilla until just combined—do not overmix.
  7. Fold the dry ingredients into the wet mixture until just combined.
  8. Fold in the chocolate chips.
  9. Divide batter among the 12 muffin cups, using a scoop for even portions.
  10. Bake at 425°F for 5 minutes, then reduce oven to 350°F (175°C) and bake an additional 25–30 minutes, until golden and a toothpick comes out clean.
  11. Cool in the pan for 10 minutes, then transfer to a wire rack. Serve warm.

Notes

Ingredient notes: This recipe is designed for unfed discard, which is inactive starter that has peaked and deflated. If using active starter, expect small differences in rise and flavor. Use full-fat sour cream or whole-milk yogurt for best texture.

Nutrition

Per muffin (approx.): 358 kcal; Carbs 50 g; Protein 5 g; Fat 16 g; Sugar 24 g; Sodium 278 mg.

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